| Version | Filesize | Screenshot | Description | 2.8 | 2.9 | 2.10 | 2.8 x86 | 2.9 x86 | 2.10 x86 | ||||
| Avogadro | 1.0.3 | 5.0MB | yes | Source | INFO |  |
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| CDK | 1.4.9 | 24MB | yes | Source | INFO | |
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| ChemaXon | 5.3.8 | 20MB | yes | Eval | INFO | |
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| GabEdit | 2.4.2 | 1.9MB | yes | Source | INFO | |
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| GchemUtils | 0.12.10 | 1.5MB | yes | Source | INFO | |
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| Ghemical | 1.02 | 2.7MB | yes | Source | INFO | |
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| JChem Base | 5.8.2 | 170MB | yes | Binary | INFO | |
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| JChemPaint | 3.2.0 | 6.6MB | yes | Binary | INFO | |
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| Jmol-12 | 12.2 | 15MB | yes | Source | INFO | |
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| Joelib | latest | 6.8MB | yes | Binary | INFO | |
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| OpenBabel | 2.3.1 | 14MB | yes | Source | INFO | |
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